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APS Payroll vs QuickBooks Payroll: Which Payroll Software Is Better?


Disclosure: We may earn commissions if you shop through the links below.

Last Updated: May 22, 2025

Both APS Payroll and QuickBooks Payroll are leading payroll software solutions, but which one is better for you and your business?

Below we compare APS Payroll and QuickBooks Payroll across nearly 50 different data points to help you make find the right one.

 

APS Payroll vs QuickBooks Payroll Reviews

APS PayrollQuickBooks Payroll
Trustpilot Rating01.1
Number of Trustpilot Reviews0551
iPhone App Rating44.6
Number of iPhone App Reviews135110400
Android App Rating3.84.1
Number of Android App Reviews35729900

APS Payroll vs QuickBooks Payroll Pricing

APS PayrollQuickBooks Payroll
Free Trialn/aYes
Free Trial Lengthn/a1 month
Cheapest Plan NamePayrollPayroll Core + Simple Start
Cheapest Plan Cost Per Month$By request$52.5
Mid Priced Plan NamePayroll + AttendancePayroll Core + Essentials
Mid Priced Plan Cost Per Month$By request$52.5
Top Plan NamePayroll + HR + AttendancePayroll Premium + Plus
Top Plan Cost Per Month$By request$85

APS Payroll vs QuickBooks Payroll Features

FeaturesAPS PayrollQuickBooks Payroll
Target Business SizeMid size businessMid size business
Unlimited Payrolls✘✘
Automated Tax Filing & Payments✔✔
E-sign I-9 & W-4✘✘
Live Customer Support✔✔
Third-Party Integrations✔✔
Ability To Manage Employee Benefits✔✔
Employee Access To Platform✔✔
Direct Deposit✔✔
Expense Reimbursement✘✔
Time Off Accrual✔✔
Pre-Tax Deductions✔✔
Wage Garnishment✔✔
Background Checks✘✘
Check Printing✔✔
Check Delivery✔✘
API✘✘

APS Payroll Payroll Features

  • Payroll Console
  • Guaranteed Tax Compliance – Federal and One State
  • Report Manager
  • Accrual Time Tracking
  • Employee Directory
  • Quarterly Tax Filings
  • New Hire Reporting
  • Direct Deposit and Paycards
  • General Ledger Reporting
  • Garnishment Processing
  • Multi-Account Management Center
  • Manager and Employee Self Service
  • Custom Report Builder
  • Custom Report Sharing
  • Existing Imports, Exports, and Integrations
  • Help Center
  • Unlimited Form W-2 Reprints Through APS
  • Unlimited Custom Fields
  • Payroll Batch Error Checking

QuickBooks Payroll Payroll Core + Simple Start Features

  • Full-service payroll
  • Includes automated taxes & forms
  • Auto Payroll
  • 1099 E-File & Pay
  • Expert product support
  • Next-day direct deposit
  • 401(k) plans
  • Health benefits for your team
  • Workers’ comp administration
  • Track income & expenses
  • Capture & organize receipts
  • Maximize tax deductions
  • Invoice & accept payments
  • Track miles
  • Run general reports
  • Send estimates
  • Track sales & sales tax
  • Manage 1099 contractors
  • Connect 1 sales channel
  • Free guided setup

APS Payroll Payroll + HR + Attendance Features

  • HR Console
  • Performance Management
  • Employee Notification Center – Newsfeed, Email, and Text
  • HR Support Center
  • Asset Tracking
  • Training Course Enrollment and Tracking
  • Total Compensation Reporting
  • Document Management with eSignatures
  • Data Integrity Validation
  • OSHA Tracking and Reporting
  • Event Tracking
  • EEO and VETS 100a Reporting

QuickBooks Payroll Payroll Premium + Plus Features

  • Full-service payroll
  • Includes automated taxes & forms
  • Auto Payroll
  • 1099 E-File & Pay
  • Expert product support
  • Same-day direct deposit
  • 24/7 expert product support
  • Expert review
  • Track time on the go
  • 401(k) plans
  • Health benefits for your team
  • Workers’ comp administration
  • HR support center
  • Track income & expenses
  • Capture & organize receipts
  • Maximize tax deductions
  • Invoice & accept payments
  • Track miles
  • Run comprehensive reports
  • Send estimates
  • Track sales & sales tax
  • Manage 1099 contractors
  • Connect all sales channels
  • Free guided setup
  • Manage bills
  • Enter time
  • Includes 5 users
  • Track project profitability
  • Track inventory

APS Payroll vs QuickBooks Payroll Pro & Cons

APS PayrollQuickBooks Payroll
Pros
  • Customer Service
  • User Friendly
  • Easy Processes
  • Reporting
  • User Interface
  • User Friendly
  • User Interface
  • Saves Time
  • Access Anywhere
  • Meets Business Needs
Cons
  • Reporting Issues
  • Technical Issues
  • Need Improvements
  • Not User Friendly
  • Adjustment Issues
  • Room for Improvement
  • Takes Time
  • Customer Service
  • Expensive
  • Desktop Issues

Other Payroll Software Comparisons

  • Wagepoint vs Zelt
  • OnPay vs PDS Vista Payroll
  • greytHR vs Dayforce
  • Remote vs Wrapbook
  • Wave vs Paypro
  • APS Payroll vs QuickBooks Payroll
  • Gusto vs Sage
  • Checkwriters vs PDS Vista Payroll
  • isolved vs Inova Payroll
  • SurePayroll vs eBacon

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