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PrimePay vs Microkeeper: Which Payroll Software Is Better?


Disclosure: We may earn commissions if you shop through the links below.

Last Updated: May 22, 2025

Both PrimePay and Microkeeper are leading payroll software solutions, but which one is better for you and your business?

Below we compare PrimePay and Microkeeper across nearly 50 different data points to help you make find the right one.

 

PrimePay vs Microkeeper Reviews

PrimePayMicrokeeper
Trustpilot Rating2.93.6
Number of Trustpilot Reviews296
iPhone App Rating24.4
Number of iPhone App Reviews40111
Android App Rating2.30
Number of Android App Reviews440

PrimePay vs Microkeeper Pricing

PrimePayMicrokeeper
Free Trialn/aYes
Free Trial Lengthn/a1 month
Cheapest Plan NamePayroll EssentialsPayroll & STP only
Cheapest Plan Cost Per Month$125$28
Mid Priced Plan NameHR EssentialsStandard
Mid Priced Plan Cost Per Month$125$28
Top Plan NameHR AdvantagePremium
Top Plan Cost Per Month$200$150

PrimePay vs Microkeeper Features

FeaturesPrimePayMicrokeeper
Target Business SizeEnterpriseEnterprise
Unlimited Payrolls✔✘
Automated Tax Filing & Payments✔✘
E-sign I-9 & W-4✘✘
Live Customer Support✔✘
Third-Party Integrations✔✔
Ability To Manage Employee Benefits✔✔
Employee Access To Platform✔✔
Direct Deposit✔✔
Expense Reimbursement✘✘
Time Off Accrual✔✔
Pre-Tax Deductions✔✔
Wage Garnishment✔✔
Background Checks✘✘
Check Printing✔✔
Check Delivery✔✘
API✔✔

PrimePay Payroll Essentials Features

  • Unlimited Payrolls
  • Tax Payments & Filings
  • Workers Compensation
  • Direct Deposit & Debit Card
  • On-Demand Pay for Employees
  • Employee Onboarding
  • Payroll & New Hire Reporting
  • Garnishments
  • 24/7 Help Center
  • Customer Portal
  • Chat and Email Support

Microkeeper Payroll & STP only Features

  • Payroll Processing
  • Leave
  • Public Holidays
  • Super Calculations
  • Employee Self Service Console
  • Paperless Employee Onboarding
  • Internal Messaging
  • Employee File Storage
  • Custom Reports
  • Native Xero Integration
  • MYOB / Sage / … Integration
  • Single Touch Payroll Compliance
  • 9-5 Email Support
  • 9-5 Phone Support

PrimePay HR Advantage Features

  • Everything in HR Essentials plus
  • Applicant Tracking & Job Posting
  • New Hire Reporting
  • Phone Support

Microkeeper Premium Features

  • Payroll Processing
  • Leave
  • Automated Award Application
  • Public Holidays
  • Super Calculations
  • SMS Rosters
  • iCal, Google Calendar, Outlook Export
  • Push Notifications
  • Print Export
  • Roster Confirmation
  • AutoRoster (Automated Shift Sheduling)
  • Shift bidding
  • Facial Recognition
  • Fingerprint Clocking
  • NFC Tag Clocking
  • GPS Clocking On Smart Device
  • Timesheet Tick Approval
  • Timesheet vs Roster Comparison
  • Employee Self Service Console
  • Paperless Employee Onboarding
  • Internal Messaging
  • Employee File Storage
  • Skills Matrix
  • Custom Reports
  • Native Xero Integration
  • MYOB / Sage / … Integration
  • Single Touch Payroll Compliance
  • Super Clearing House
  • 9-5 Email Support
  • 9-5 Phone Support

PrimePay vs Microkeeper Pro & Cons

PrimePayMicrokeeper
Pros
  • Customer Service
  • User Friendly
  • User Interface
  • Comprehensive Solution
  • Pricing
  • 100% Australia Focused
  • Good UX
  • Great tech support
  • Budget-friendly (only for payroll only and standard packages)
  • Updates and information about governmental requirements
  • All-in-one solution
Cons
  • Customer Service
  • Adjustment Issues
  • Slow
  • User Interface
  • Customization Limitations
  • Reporting could use significant improvement
  • Integration with platforms such as MYOB isn’t seamless and is prone to error
  • Limited employee dashboard
  • Pricey premium package that only seems to be targeting big businesses
  • Starter plan is pretty useless

Other Payroll Software Comparisons

  • isolved vs Wagepoint
  • Razorpay vs Paycor
  • Papaya Global vs Wrapbook
  • CheckMark Payroll vs TriNet
  • Aruti vs EBS PaySuite
  • Payfit vs Netchex
  • Paycom vs Inova Payroll
  • PayCaptain vs Darwinbox
  • Patriot Software vs Keka
  • SurePayroll vs Inova Payroll

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