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OnPay vs QuickBooks Payroll: Which Payroll Software Is Better?


Disclosure: We may earn commissions if you shop through the links below.

Last Updated: May 22, 2025

Both OnPay and QuickBooks Payroll are leading payroll software solutions, but which one is better for you and your business?

Below we compare OnPay and QuickBooks Payroll across nearly 50 different data points to help you make find the right one.

 

OnPay vs QuickBooks Payroll Reviews

OnPayQuickBooks Payroll
Trustpilot Rating4.11.1
Number of Trustpilot Reviews220551
iPhone App Rating1.84.6
Number of iPhone App Reviews26110400
Android App Ratingnot available4.1
Number of Android App Reviewsnot available29900

OnPay vs QuickBooks Payroll Pricing

OnPayQuickBooks Payroll
Free TrialYesYes
Free Trial Length1 month1 month
Cheapest Plan Namen/aPayroll Core + Simple Start
Cheapest Plan Cost Per Month$n/a$52.5
Mid Priced Plan Namen/aPayroll Core + Essentials
Mid Priced Plan Cost Per Month$n/a$52.5
Top Plan Namen/aPayroll Premium + Plus
Top Plan Cost Per Month$n/a$85

OnPay vs QuickBooks Payroll Features

FeaturesOnPayQuickBooks Payroll
Target Business SizeMid size businessMid size business
Unlimited Payrolls✔✘
Automated Tax Filing & Payments✔✔
E-sign I-9 & W-4✔✘
Live Customer Support✔✔
Third-Party Integrations✔✔
Ability To Manage Employee Benefits✔✔
Employee Access To Platform✔✔
Direct Deposit✔✔
Expense Reimbursement✘✔
Time Off Accrual✔✔
Pre-Tax Deductions✔✔
Wage Garnishment✔✔
Background Checks✘✘
Check Printing✔✔
Check Delivery✔✘
API✘✘

OnPay n/a Features

  • Unlimited monthly pay runs
  • Automated tax payments and filings
  • Free W-2 and 1099 processing
  • HR tools and software integrations
  • Expert support whenever you need it

QuickBooks Payroll Payroll Core + Simple Start Features

  • Full-service payroll
  • Includes automated taxes & forms
  • Auto Payroll
  • 1099 E-File & Pay
  • Expert product support
  • Next-day direct deposit
  • 401(k) plans
  • Health benefits for your team
  • Workers’ comp administration
  • Track income & expenses
  • Capture & organize receipts
  • Maximize tax deductions
  • Invoice & accept payments
  • Track miles
  • Run general reports
  • Send estimates
  • Track sales & sales tax
  • Manage 1099 contractors
  • Connect 1 sales channel
  • Free guided setup

OnPay n/a Features

n/a

QuickBooks Payroll Payroll Premium + Plus Features

  • Full-service payroll
  • Includes automated taxes & forms
  • Auto Payroll
  • 1099 E-File & Pay
  • Expert product support
  • Same-day direct deposit
  • 24/7 expert product support
  • Expert review
  • Track time on the go
  • 401(k) plans
  • Health benefits for your team
  • Workers’ comp administration
  • HR support center
  • Track income & expenses
  • Capture & organize receipts
  • Maximize tax deductions
  • Invoice & accept payments
  • Track miles
  • Run comprehensive reports
  • Send estimates
  • Track sales & sales tax
  • Manage 1099 contractors
  • Connect all sales channels
  • Free guided setup
  • Manage bills
  • Enter time
  • Includes 5 users
  • Track project profitability
  • Track inventory

OnPay vs QuickBooks Payroll Pro & Cons

OnPayQuickBooks Payroll
Pros
  • Customer Service
  • User Interface
  • User Friendly
  • Pricing
  • Saves Time
  • User Friendly
  • User Interface
  • Saves Time
  • Access Anywhere
  • Meets Business Needs
Cons
  • Not User Friendly
  • Need Improvements
  • Slow
  • Customer Service
  • Room for Improvement
  • Room for Improvement
  • Takes Time
  • Customer Service
  • Expensive
  • Desktop Issues

Other Payroll Software Comparisons

  • greytHR vs EBS PaySuite
  • BambooHR vs TriNet
  • Wagepoint vs Zelt
  • Paychex vs Online Paystub Generator
  • Paycom vs Kashflow Payroll
  • BambooHR vs Dayforce
  • Arbonum vs Keka
  • PrimePay vs EPAY Payroll
  • Patriot Software vs Sage
  • Superworks vs Zelt

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