APS Payroll vs Justworks: Which Payroll Software Is Better?

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Last Updated: May 22, 2025

Both APS Payroll and Justworks are leading payroll software solutions, but which one is better for you and your business?

Below we compare APS Payroll and Justworks across nearly 50 different data points to help you make find the right one.

APS Payroll vs Justworks Reviews

		APS Payroll	Justworks
Trustpilot Rating		0	4.3
Number of Trustpilot Reviews		0	13
iPhone App Rating		4	4.3
Number of iPhone App Reviews		135	132
Android App Rating		3.8	4.1
Number of Android App Reviews		357	38

APS Payroll vs Justworks Pricing

	APS Payroll	Justworks
Free Trial	n/a	n/a
Free Trial Length	n/a	n/a
Cheapest Plan Name	Payroll	Basic
Cheapest Plan Cost Per Month	$By request	$n/a
Mid Priced Plan Name	Payroll + Attendance	n/a
Mid Priced Plan Cost Per Month	$By request	$n/a
Top Plan Name	Payroll + HR + Attendance	Plus
Top Plan Cost Per Month	$By request	$99

APS Payroll vs Justworks Features

Features	APS Payroll	Justworks
Target Business Size	Mid size business	Mid size business
Unlimited Payrolls	✘	✘
Automated Tax Filing & Payments	✔	✔
E-sign I-9 & W-4	✘	✔
Live Customer Support	✔	✔
Third-Party Integrations	✔	✔
Ability To Manage Employee Benefits	✔	✔
Employee Access To Platform	✔	✔
Direct Deposit	✔	✔
Expense Reimbursement	✘	✔
Time Off Accrual	✔	✔
Pre-Tax Deductions	✔	✔
Wage Garnishment	✔	✔
Background Checks	✘	✘
Check Printing	✔	✘
Check Delivery	✔	✘
API	✘	✘

APS Payroll Payroll Features

Payroll Console
Guaranteed Tax Compliance – Federal and One State
Report Manager
Accrual Time Tracking
Employee Directory
Quarterly Tax Filings
New Hire Reporting
Direct Deposit and Paycards
General Ledger Reporting
Garnishment Processing
Multi-Account Management Center
Manager and Employee Self Service
Custom Report Builder
Custom Report Sharing
Existing Imports, Exports, and Integrations
Help Center
Unlimited Form W-2 Reprints Through APS
Unlimited Custom Fields
Payroll Batch Error Checking

Justworks Basic Features

Payroll for Salaried & Hourly Employees
Off-Cycle Payments
Vendor & Contractor Payments
Employer Payroll Tax Fillings
W-2 & 1099 Filings
Unemployment Insurance Filings
Employment Practices Liability Insurance
24/7 Support
HR Consulting
Harassment Prevention & Inclusion Trainings
Online Employee Onboarding
PTO Management
Calendar, Doc Center, Directory
Accounting Software Integrations
Reporting
Commuter Benefits
Plan Setup
Mobile App for Employees
Expense Management Tool
Workers’ Comp (required)
Life & Disability Insurance
Health & Wellness Perks
Fitness Memberships
401(k)
International Contractor Payments

APS Payroll Payroll + HR + Attendance Features

HR Console
Performance Management
Employee Notification Center – Newsfeed, Email, and Text
HR Support Center
Asset Tracking
Training Course Enrollment and Tracking
Total Compensation Reporting
Document Management with eSignatures
Data Integrity Validation
OSHA Tracking and Reporting
Event Tracking
EEO and VETS 100a Reporting

Justworks Plus Features

APS Payroll vs Justworks Pro & Cons

	APS Payroll	Justworks
Pros	Customer Service User Friendly Easy Processes Reporting User Interface	Customer Service User Interface Ideal for Small Businesses User Friendly Pricing
Cons	Reporting Issues Technical Issues Need Improvements Not User Friendly Adjustment Issues	Need Improvements Expensive Integration Issues Not User Friendly Adjustment Issues

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