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ThePayStubs vs CheckMark Payroll: Which Payroll Software Is Better?


Disclosure: We may earn commissions if you shop through the links below.

Last Updated: May 22, 2025

Both ThePayStubs and CheckMark Payroll are leading payroll software solutions, but which one is better for you and your business?

Below we compare ThePayStubs and CheckMark Payroll across nearly 50 different data points to help you make find the right one.

 

ThePayStubs vs CheckMark Payroll Reviews

ThePayStubsCheckMark Payroll
Trustpilot Rating4.23.5
Number of Trustpilot Reviews5850
iPhone App Ratingnot availablenot available
Number of iPhone App Reviewsnot availablenot available
Android App Ratingnot availablenot available
Number of Android App Reviewsnot availablenot available

ThePayStubs vs CheckMark Payroll Pricing

ThePayStubsCheckMark Payroll
Free TrialYesYes
Free Trial Length14 days2 months
Cheapest Plan NameStubCheckMark Payroll Pro
Cheapest Plan Cost Per Month$n/a$n/a
Mid Priced Plan Namen/an/a
Mid Priced Plan Cost Per Month$n/a$n/a
Top Plan Namen/aCheckMark Payroll Pro+
Top Plan Cost Per Month$n/a$619

ThePayStubs vs CheckMark Payroll Features

FeaturesThePayStubsCheckMark Payroll
Target Business SizeSmall businessMid size business
Unlimited Payrolls✘✔
Automated Tax Filing & Payments✘✔
E-sign I-9 & W-4✘✘
Live Customer Support✘✔
Third-Party Integrations✘✔
Ability To Manage Employee Benefits✘✔
Employee Access To Platform✘✔
Direct Deposit✘✔
Expense Reimbursement✘✔
Time Off Accrual✘✔
Pre-Tax Deductions✔✔
Wage Garnishment✔✔
Background Checks✘✘
Check Printing✘✔
Check Delivery✘✘
API✘✘

ThePayStubs Stub Features

  • Add & save employee and contractors details only once
  • Payroll schedule for employee pay stubs
  • Easy contractor pay stubs
  • W2s and 1099s auto-generated for you
  • Tax compliance across all 50 states
  • All documents stored at one place
  • Affordable monthly membership based on business size
  • Dedicated support team

CheckMark Payroll CheckMark Payroll Pro Features

  • Self Service Payroll
  • Automatic Payroll Calculation
  • Unlimited Companies
  • Unlimited Salaried & Hourly Employees
  • Unlimited Payrolls (Regular, Bonus, Off-Cycle, etc.)
  • All Pay Frequencies
  • Multiple Pay Rates
  • MICR Encoded Check Printing
  • ACH Direct Deposit
  • Printing & E-Filing of Forms 941, 940, 944, 943, W-2, & W-3
  • Employer Payroll Tax Filings
  • Access to 40+ Types of Payroll Reports
  • Employee Benefits (Health, Retirement, Insurance, etc.)
  • Customized Vacation and Sick Leave Policies
  • Customized Deductions and Garnishments
  • Up to 90 mins within 12 months
  • Online access to program fixes

ThePayStubs n/a Features

n/a

CheckMark Payroll CheckMark Payroll Pro+ Features

  • Self Service Payroll
  • Automatic Payroll Calculation
  • Unlimited Companies
  • Unlimited Salaried & Hourly Employees
  • Unlimited Payrolls (Regular, Bonus, Off-Cycle, etc.)
  • All Pay Frequencies
  • Multiple Pay Rates
  • MICR Encoded Check Printing
  • ACH Direct Deposit
  • Printing & E-Filing of Forms 941, 940, 944, 943, W-2, & W-3
  • Employer Payroll Tax Filings
  • Access to 40+ Types of Payroll Reports
  • Employee Benefits (Health, Retirement, Insurance, etc.)
  • Customized Vacation and Sick Leave Policies
  • Customized Deductions and Garnishments
  • Up to 300 mins of support within 12 months
  • Exclusive Pro+ toll-free phone number
  • Top-of-the-queue priority
  • Reduced data recovery rates
  • Online access to program fixes
  • Exclusive Pro+ Support Live Chat

ThePayStubs vs CheckMark Payroll Pro & Cons

ThePayStubsCheckMark Payroll
Pros
  • Seamless Creation Process
  • Round-The-Clock Customer Support
  • Ready-Made Templates
  • Professional Stubs For Record-Keeping
  • Direct deposit option
  • Easy to use and interfaces with CheckMark’s Accounting program, MultiLedger
  • Automated reports
Cons
  • Technical support, glitches with Mac
  • High cost
  • More features like direct sms, email, other tax purpose forms

Other Payroll Software Comparisons

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  • Deel vs Superworks
  • ADP vs Papaya Global
  • Everee Payroll vs Keka
  • Fingercheck vs Revelo
  • Paycor vs Trolley
  • Paycom vs Arbonum
  • Square Payroll vs eBacon
  • Arbonum vs UKG
  • Oytser HR vs Paycor

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