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Microkeeper vs Wagepoint: Which Payroll Software Is Better?


Disclosure: We may earn commissions if you shop through the links below.

Last Updated: May 22, 2025

Both Microkeeper and Wagepoint are leading payroll software solutions, but which one is better for you and your business?

Below we compare Microkeeper and Wagepoint across nearly 50 different data points to help you make find the right one.

 

Microkeeper vs Wagepoint Reviews

MicrokeeperWagepoint
Trustpilot Rating3.64.5
Number of Trustpilot Reviews96237
iPhone App Rating4.40
Number of iPhone App Reviews1110
Android App Rating00
Number of Android App Reviews00

Microkeeper vs Wagepoint Pricing

MicrokeeperWagepoint
Free TrialYesn/a
Free Trial Length1 monthn/a
Cheapest Plan NamePayroll & STP onlyCost per payroll
Cheapest Plan Cost Per Month$28$n/a
Mid Priced Plan NameStandardn/a
Mid Priced Plan Cost Per Month$28$n/a
Top Plan NamePremiumn/a
Top Plan Cost Per Month$150$n/a

Microkeeper vs Wagepoint Features

FeaturesMicrokeeperWagepoint
Target Business SizeEnterpriseSmall business
Unlimited Payrolls✘✘
Automated Tax Filing & Payments✘✔
E-sign I-9 & W-4✘✘
Live Customer Support✘✘
Third-Party Integrations✔✔
Ability To Manage Employee Benefits✔✘
Employee Access To Platform✔✔
Direct Deposit✔✔
Expense Reimbursement✘✔
Time Off Accrual✔✔
Pre-Tax Deductions✔✔
Wage Garnishment✔✔
Background Checks✘✘
Check Printing✔✔
Check Delivery✘✘
API✔✘

Microkeeper Payroll & STP only Features

  • Payroll Processing
  • Leave
  • Public Holidays
  • Super Calculations
  • Employee Self Service Console
  • Paperless Employee Onboarding
  • Internal Messaging
  • Employee File Storage
  • Custom Reports
  • Native Xero Integration
  • MYOB / Sage / … Integration
  • Single Touch Payroll Compliance
  • 9-5 Email Support
  • 9-5 Phone Support

Wagepoint Cost per payroll Features

  • Pay employees and contractors.
  • Direct deposit.
  • Online portal where employees can access paystubs and T4s.
  • Year-end T4/T4As and reporting.
  • No additional charges for money movement or remittance filing.
  • Federal and provincial/territorial income tax.
  • Employment Insurance/Québec Parental Insurance Plan (EI/QPIP) (employer and employee).
  • Canada Pension Plan/Québec Pension Plan (CPP/QPP) (employer and employee).
  • Monthly and accelerated remittance schedules.
  • Streamlined Record of Employment (ROE) submissions.
  • Comprehensive preset income and deduction codes.
  • Custom incomes and deductions.
  • Statutory holiday pay.
  • Workers’ Compensation (WCB/WSIB).
  • Employer Health Tax/Health Services Fund (EHT/HSF).
  • Built-in tips and guides.
  • Email processing reminders.
  • World-class support.
  • Multiple paygroups based on frequency.
  • Off-cycle payrolls.
  • Cloud-based software that can be accessed from anywhere.
  • 2048-bit encryption using TLS 1.3 or 1.2.
  • Industry- and bank-grade processes.
  • Wagepoint staff are continuously trained on best practices.
  • Two-factor authentication for payroll administrators.
  • Client may also enable or disable employee access.
  • Posting journal.
  • Payroll register.
  • Payroll tax summary.
  • Deposit summary.
  • Workers’ Compensation (WCB/WSIB).

Microkeeper Premium Features

  • Payroll Processing
  • Leave
  • Automated Award Application
  • Public Holidays
  • Super Calculations
  • SMS Rosters
  • iCal, Google Calendar, Outlook Export
  • Push Notifications
  • Print Export
  • Roster Confirmation
  • AutoRoster (Automated Shift Sheduling)
  • Shift bidding
  • Facial Recognition
  • Fingerprint Clocking
  • NFC Tag Clocking
  • GPS Clocking On Smart Device
  • Timesheet Tick Approval
  • Timesheet vs Roster Comparison
  • Employee Self Service Console
  • Paperless Employee Onboarding
  • Internal Messaging
  • Employee File Storage
  • Skills Matrix
  • Custom Reports
  • Native Xero Integration
  • MYOB / Sage / … Integration
  • Single Touch Payroll Compliance
  • Super Clearing House
  • 9-5 Email Support
  • 9-5 Phone Support

Wagepoint n/a Features

n/a

Microkeeper vs Wagepoint Pro & Cons

MicrokeeperWagepoint
Pros
  • 100% Australia Focused
  • Good UX
  • Great tech support
  • Budget-friendly (only for payroll only and standard packages)
  • Updates and information about governmental requirements
  • All-in-one solution
  • User-friendly setup
  • Customer service
  • Affordability
Cons
  • Reporting could use significant improvement
  • Integration with platforms such as MYOB isn’t seamless and is prone to error
  • Limited employee dashboard
  • Pricey premium package that only seems to be targeting big businesses
  • Starter plan is pretty useless
  • Limited accounting software integrations
  • Poor PTO and time-tracking tools
  • No HR tools or HCM-adjacent features
  • No mobile payroll app

Other Payroll Software Comparisons

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  • greytHR vs Xero Payroll
  • ADP vs UKG
  • Remote vs Push Payroll
  • Paylocity vs Hourly
  • Patriot Software vs Netchex
  • Roll by ADP vs Revelo
  • Paychex vs Trolley
  • isolved vs eBacon
  • Fingercheck vs Everee Payroll

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