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CheckMark Payroll vs PayCaptain: Which Payroll Software Is Better?


Disclosure: We may earn commissions if you shop through the links below.

Last Updated: April 25, 2025

Both CheckMark Payroll and PayCaptain are leading payroll software solutions, but which one is better for you and your business?

Below we compare CheckMark Payroll and PayCaptain across nearly 50 different data points to help you make find the right one.

 

CheckMark Payroll vs PayCaptain Reviews

CheckMark PayrollPayCaptain
Trustpilot Rating3.54.4
Number of Trustpilot Reviews012
iPhone App Ratingnot available4.8
Number of iPhone App Reviewsnot available12
Android App Ratingnot available0
Number of Android App Reviewsnot available0

CheckMark Payroll vs PayCaptain Pricing

CheckMark PayrollPayCaptain
Free TrialYesn/a
Free Trial Length2 monthsn/a
Cheapest Plan NameCheckMark Payroll ProBasic
Cheapest Plan Cost Per Month$n/a$199
Mid Priced Plan Namen/aGrowth
Mid Priced Plan Cost Per Month$n/a$199
Top Plan NameCheckMark Payroll Pro+Enterprise
Top Plan Cost Per Month$619$399

CheckMark Payroll vs PayCaptain Features

FeaturesCheckMark PayrollPayCaptain
Target Business SizeMid size businessEnterprise
Unlimited Payrolls✔✘
Automated Tax Filing & Payments✔✘
E-sign I-9 & W-4✘✘
Live Customer Support✔✘
Third-Party Integrations✔✔
Ability To Manage Employee Benefits✔✔
Employee Access To Platform✔✔
Direct Deposit✔✘
Expense Reimbursement✔✘
Time Off Accrual✔✘
Pre-Tax Deductions✔✔
Wage Garnishment✔✔
Background Checks✘✘
Check Printing✔✘
Check Delivery✘✘
API✘✔

CheckMark Payroll CheckMark Payroll Pro Features

  • Self Service Payroll
  • Automatic Payroll Calculation
  • Unlimited Companies
  • Unlimited Salaried & Hourly Employees
  • Unlimited Payrolls (Regular, Bonus, Off-Cycle, etc.)
  • All Pay Frequencies
  • Multiple Pay Rates
  • MICR Encoded Check Printing
  • ACH Direct Deposit
  • Printing & E-Filing of Forms 941, 940, 944, 943, W-2, & W-3
  • Employer Payroll Tax Filings
  • Access to 40+ Types of Payroll Reports
  • Employee Benefits (Health, Retirement, Insurance, etc.)
  • Customized Vacation and Sick Leave Policies
  • Customized Deductions and Garnishments
  • Up to 90 mins within 12 months
  • Online access to program fixes

PayCaptain Basic Features

  • All analytics features
  • Up to 250,000 tracked visits
  • Normal support
  • Mobile app
  • Up to 3 team members

CheckMark Payroll CheckMark Payroll Pro+ Features

  • Self Service Payroll
  • Automatic Payroll Calculation
  • Unlimited Companies
  • Unlimited Salaried & Hourly Employees
  • Unlimited Payrolls (Regular, Bonus, Off-Cycle, etc.)
  • All Pay Frequencies
  • Multiple Pay Rates
  • MICR Encoded Check Printing
  • ACH Direct Deposit
  • Printing & E-Filing of Forms 941, 940, 944, 943, W-2, & W-3
  • Employer Payroll Tax Filings
  • Access to 40+ Types of Payroll Reports
  • Employee Benefits (Health, Retirement, Insurance, etc.)
  • Customized Vacation and Sick Leave Policies
  • Customized Deductions and Garnishments
  • Up to 300 mins of support within 12 months
  • Exclusive Pro+ toll-free phone number
  • Top-of-the-queue priority
  • Reduced data recovery rates
  • Online access to program fixes
  • Exclusive Pro+ Support Live Chat

PayCaptain Enterprise Features

  • Everything on Growth plan
  • Up to 5,000,000 tracked visits
  • Dedicated support
  • Mobile app
  • Up to 50 team members

CheckMark Payroll vs PayCaptain Pro & Cons

CheckMark PayrollPayCaptain
Pros
  • Direct deposit option
  • Easy to use and interfaces with CheckMark’s Accounting program, MultiLedger
  • Automated reports
  • The built-in features of on-demand pay and digital wallets
  • App interface is modern, simple and engaging
  • The integration process was simple and straightforward
Cons
  • Technical support, glitches with Mac
  • High cost
  • More features like direct sms, email, other tax purpose forms
  • Accessibility to past employees P45’s
  • UX improvement in terms of how it looks
  • Email notifications of new payslips

Other Payroll Software Comparisons

  • Razorpay vs Toast
  • Inova Payroll vs TriNet
  • Everee Payroll vs Proliant
  • Remote vs Online Paystub Generator
  • Patriot Software vs Wagepoint
  • Namely vs Workday
  • SumoPayroll vs Ready Pay by HR3
  • Paycom vs APS Payroll
  • Paylocity vs WorkZoom
  • OnPay vs Keka

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